Selected Protein id is S5FW12
Primary Information
| UniportKB Entry | S5FW12 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | VSG |
| Protein Name | Variant surface glycoprotein (Fragment) |
| Length | 462 |
| Sequence | KFMLAAVMLLLLAVAPGAPAVTARANKAEFSALCGLVQLCRSELTVPELSGAASTSYEHILDFNMTTSDDDWRKLFRNDSEPSKYHESKPKEITAPAEWDANWKEWLAAAKNADRPDEKQHIKQSKLHLLSANDKKSANFIVRQLAREASAWLSSLTENPTTTAALQKTALTTTMKEVLYGEATAAPTTVTTQQAFKKRTAATAGDCKKGTEDGGPISLYATLACVCGHDQDSGVTGLCADKQTASNDWQTGGKTLADDKMRNIADLCPAGSNTELTTTTLTGLLNAVKSLITIHSNDGFLGAVVSDCDGTGTNGACVKYPNYKTTPTELKKVKWLEKLETLNVALREREELIAREKLVVSMLQAAEGKAQSLGTHPPPALAATQLNTAALPHIDTKQQSKDCTAHKDNKKACTDANCKWEPKDGKSETQGECKPKEGEGTTNAVGDGDGAKEGTAASSGCA |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
21 |
0.475 |
- |
- |
| max. Y |
21 |
0.671 |
- |
- |
| max. S |
10 |
0.981 |
- |
- |
| mean S |
1--20 |
0.946 |
- |
- |
| D |
1--20 |
0.820 |
0.45 |
YES |
| Name=S5FW12 SP='YES' Cleavage site between pos. 20 and 21: APA-VT D=0.820 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.054 |
0.951 |
0.025 |
S |
1 |
| ExpAA=4.41 |
First60=4.41 |
PredHel=0 |
Topology=o |