Selected Protein id is Q580P0
Primary Information
| UniportKB Entry | Q580P0 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | Tb927.4.5560 |
| Protein Name | Variant surface glycoprotein (VSG), putative |
| Length | 516 |
| Sequence | MIGQWSKIFLIALALTSPALASFQADNAADLQLLCTAIALDGAEPTKLTTADSAETTIKHARALNMSAADETWQEIFVGGKSKNSWEAKKQKVTGEPFKSHWEADYDKWVEDKETVDSGTGQSKWLTLNPRPASAPALQAAAEKINSTLRQLLKQQAALETATTEATETYPNEAKDELIQALYGTGVTQPKFTDGKTIKHAATYANGCAKNAGLSIYGDVMCICGTQSADTSDQCADPVIAIKWSGGNDQSVISQLKAKCKTLKPAEYTAGDLEALVQRIVGRVRSAKGAGNDVIHYLGKVNLGTCTGANSQACAIYASDSGKHSAITGGLNIPWLNHLAKAAKALRKAEAAAKNTETSSKHIKILADAIQTAYSATRYNMMGKPAAAQTETQSKKTDGEDGKQHHCKQKTNQTKEECKKLGCDHDEKENKCKPKAGTEDKVAGTGDATTPNCASHTEKTKCEAENTGKSSPVCGWRKGKDGETEPEKEKCRSSSFLLNKKFALSMVSAAFVALLF |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
22 |
0.752 |
- |
- |
| max. Y |
22 |
0.832 |
- |
- |
| max. S |
12 |
0.956 |
- |
- |
| mean S |
1--21 |
0.92 |
- |
- |
| D |
1--21 |
0.880 |
0.45 |
YES |
| Name=Q580P0 SP='YES' Cleavage site between pos. 21 and 22: ALA-SF D=0.880 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.030 |
0.971 |
0.032 |
S |
1 |
| ExpAA=0.67 |
First60=0.63 |
PredHel=0 |
Topology=o |