Selected Protein id is Q580N8
Primary Information
| UniportKB Entry | Q580N8 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | Tb927.4.5700 |
| Protein Name | Variant surface glycoprotein (VSG, atypical), putative |
| Length | 476 |
| Sequence | MAIKQQFTAFFAITIAAAASDLHKRDAKITTACDTAAYLDHMAGEASAAFTNSMQATNTAWQMATKLAAAGNKIGSQQGAGLVLLAATVAEDAANALQNLQFKGPALIRGIRSLQALSTQQDIVGDLELTAIERKEAAAVASFISANNGDAISLNLNIKTFRACFSADNTRQPVPGGGQAADGTNNIVMSQLKVTPHTTTLTQGPRLCYTAGTTATTEQCHDKSSGTSNMMLLQGKPLTTAAITFKRKVAEGGEYAATDGEASNAIPIKTELTQLLKDVKELEDNVADLPYIFTADKAFTMTTTAEFRQRMATALVKEDAKYSTATIKNQVDTLEKTLYGETSNDFQRWVLDLLDSIEVSGSSIGEDKPVALNKVGPTIKVLRAAGYYSAAKLIREKKQPSKTQAQDGSDQEENDCKTKSKDECKSGKCELKGGKCVEKEEVKVEGAGTQGTQNATGRNLFIINKALFCLQFLFLG |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
19 |
0.232 |
- |
- |
| max. Y |
19 |
0.353 |
- |
- |
| max. S |
16 |
0.784 |
- |
- |
| mean S |
1--18 |
0.544 |
- |
- |
| D |
1--18 |
0.456 |
0.45 |
YES |
| Name=Q580N8 SP='YES' Cleavage site between pos. 18 and 19: AAA-AS D=0.456 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.058 |
0.770 |
0.119 |
S |
2 |
| ExpAA=0.19 |
First60=0.14 |
PredHel=0 |
Topology=o |