Selected Protein id is Q57X39
Primary Information
| UniportKB Entry | Q57X39 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | Tb927.5.4730 |
| Protein Name | Variant surface glycoprotein (VSG, atypical), putative |
| Length | 474 |
| Sequence | MHILKFATLIAAAVIATAGADKQSKNRADCTDPCTCMARIDVALNRLEGAMPQTLQKIASNAAYMSELQMAAGSTDAELAKLVQPLLAVAIDVQQDATTDLPTASKTISETLNALTQRKALFEAIKKLSGTYDGSIITKTSGHFGTAQYTAAPIVAVQREPCPKLSGTEEYTYDELNFDHGQGIGLPQLAIELDQACYKNTEGTPCDANDGSDKLKTKIKFGTKHGPAGTSPLANGRFATTVQGTINLSNETAADNKKKLSKAAAADAKLTNIPDLSKRETYTSHPAFSLLVNRLLMSTAPTVEITGQVATATEAFINKNYGSDQEQFKAKIWDKIKTATTVYYENKAKKTKKVSALSGDQKVTALPAAFFKEQKETTTTKKETAEDAPKKTDTEDKKGEKKDGDKTSGESFSSYQTKDACEAVNKDGKKHCGWKRKVIATPKRIKKPAQTVVFSSIKKLALCVAAAFVSILVF |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
21 |
0.232 |
- |
- |
| max. Y |
20 |
0.448 |
- |
- |
| max. S |
4 |
0.92 |
- |
- |
| mean S |
1--19 |
0.866 |
- |
- |
| D |
1--19 |
0.673 |
0.45 |
YES |
| Name=Q57X39 SP='YES' Cleavage site between pos. 19 and 20: TAG-AD D=0.673 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.030 |
0.900 |
0.123 |
S |
2 |
| ExpAA=4.76 |
First60=0.12 |
PredHel=0 |
Topology=o |