Selected Protein id is Q4FKN5
Primary Information
| UniportKB Entry | Q4FKN5 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | Tb10.v4.0056 |
| Protein Name | Variant surface glycoprotein (VSG), putative |
| Length | 555 |
| Sequence | MRSSSSFNRLIHKNKPRSVTDMLVALLILVKLIHPASAAASDVAAGSNKREHAVVCNLMQLATGDPFVSGCPDDISDEVLALNVMNMSVAEESWKSKFIGESDAALQWSQELVTAKGYPETWANHWPVWTEAAKRVRSDEQTRHDLKEAQYSMLSPGERKAAQQELRAILNATASLIQATNSLKAEISNGDKAKVKEFLNEAAYGAKTGKGDYAQAGTRGAGVNDKTTCDDGGKVADQQTLAQVLICLCATDSGGAASNVCTAVQELTADWTTNAVDMATNGLKNILASCRLSETKQTRPEAIYAALSIVEALIQVKAGDGYLGHTKTGQCTGSQSQGMCVKYASYVTGDKATFSQIEWVAKLLAAADAMHRRHAACIEYRNIKHSLTVATAQVWHIPASIKLRQVSGKKAAAYEPTDSKKSEANKQQENVECKAIKQAAKCREKQPTCEWKGKNDNDGEHCKLNETNVSKQESQAATDGETSGADPNCGQYTDPDKCSKAPGKPKEGKKSVCGWIEGKCQDSSFLVNKQFALSVATAIVGFVEFYKIKNFGQFY |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
39 |
0.734 |
- |
- |
| max. Y |
39 |
0.71 |
- |
- |
| max. S |
37 |
0.884 |
- |
- |
| mean S |
1--38 |
0.515 |
- |
- |
| D |
1--38 |
0.605 |
0.45 |
YES |
| Name=Q4FKN5 SP='YES' Cleavage site between pos. 38 and 39: ASA-AA D=0.605 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.207 |
0.494 |
0.154 |
S |
4 |
| ExpAA=2.53 |
First60=1.42 |
PredHel=0 |
Topology=o |