Selected Protein id is Q38G47
Primary Information
| UniportKB Entry | Q38G47 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | Tb09.354.0060 |
| Protein Name | Variant surface glycoprotein (VSG, atypical), putative |
| Length | 487 |
| Sequence | MQSSQWLQPLVLFVMTVILATALKRVDAATGVGIKKSTWEPLCQVSEELDGIAGHVLQEATEMIAATIDFDAAAKRARIFSLKNPMHKWTKAAITIATAYEAKAAAAVRQLKDTYIKQQVEAASRSAYVKGRVDDFLKLLEQTVDGSNNACLLADENADTPVTRSATTKLGQTECKLTQSSITATRRTPTHITTAGYINLVEGTGGDKHQPTAASKECHLTTAHTSKGFAKGEGTAAAVTVMAGYLTIPNSAAELTAATKANLITASEGGIAAWSHAHAAIKLLDRTLPTEYANESGDLTERAALKEAAQNLFGEAKDHQGSDGKKAIEAVFSNTKADTINTIITLIEKEDIPKGAAARPTPAKLGEIKNSIELTNLLSYYQQRLSQDFETLDKRLEESTKHQDPKATEKICGEAKDDEDKCKGLKDKGCSFNEQDKKCELKKDVKEKLEKSNQETEGNDGKRTNTTGSNSILIHKSPLLLVVLLLK |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
29 |
0.59 |
- |
- |
| max. Y |
23 |
0.7 |
- |
- |
| max. S |
16 |
0.965 |
- |
- |
| mean S |
1--22 |
0.92 |
- |
- |
| D |
1--22 |
0.819 |
0.45 |
YES |
| Name=Q38G47 SP='YES' Cleavage site between pos. 22 and 23: ATA-LK D=0.819 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.037 |
0.955 |
0.038 |
S |
1 |
| ExpAA=3.77 |
First60=3.61 |
PredHel=0 |
Topology=o |