Selected Protein id is Q38G42
Primary Information
| UniportKB Entry | Q38G42 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | Tb09.142.0230 |
| Protein Name | Variant surface glycoprotein (VSG, atypical), putative |
| Length | 506 |
| Sequence | MKARQIITHLAVLLLLVTPQARAAAPADGDNLATLAYLCPALQLADGDITLHPEQSNLDGSLQDLLALNMSLADAAWAAQFKASPPGATPVAATEQQQKQQAGTPEQIAAWTAAKANVDNTAKFKDVLAKYGYTQENASKLIPLKGPIAQYADAAFGIQQATKTSEKDDKTDSDLKALIKTAIYGHDGGYDATKKEEMGLQGTQNRENHCTAQSNSNPIQTISTMVACLCAVKDDMVSGKAPCGPHADATLKWQADGPPQTPLWPKIRSICPKADGGTVTADRIAAAIAAAKMAFFSKGNDLYVGKFDMAGCDGSNNGACIKYTDQASNSVPSFKQAAWIDKLETVETSLRTRQQNQDIQKQAQTKIETLKQLVKAAAKHAEKLTAPTTQHHSNPKLATTNDKNSQAQKTADCSKLEKAECKPDVGCRYNETTNKCEEDPKSPVVQANKEAKGGATNSEGKNYSGKKTEGECKDSCKWDGKECKDSIFLFRKKFFLIVFAFLVLLF |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
24 |
0.771 |
- |
- |
| max. Y |
24 |
0.844 |
- |
- |
| max. S |
21 |
0.961 |
- |
- |
| mean S |
1--23 |
0.924 |
- |
- |
| D |
1--23 |
0.888 |
0.45 |
YES |
| Name=Q38G42 SP='YES' Cleavage site between pos. 23 and 24: ARA-AA D=0.888 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.068 |
0.969 |
0.012 |
S |
1 |
| ExpAA=3.63 |
First60=0.70 |
PredHel=0 |
Topology=o |