Selected Protein id is Q38EM9
Primary Information
| UniportKB Entry | Q38EM9 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | Tb09.160.5220 |
| Protein Name | RNA pseudouridylate synthase protein, putative (EC 4.2.1.70) |
| Length | 1279 |
| Sequence | MGSLCLCLDLHSLIILINHKGCNVNMSVGKVAMVGGGGRVTVPRKYFRAAVRGLQHVPWWCQSDARTSATGKHPLDEALKCAATFQSRSLKQWEDALSVSSPYRSTDHLAAGKAVVTAPGTTITLQSLADYDGGEAEDQEESHEVSAAFVEKQQAKLHAMLQQWVAYCAFHCTRAEFAARQSLVAQRLLLSPLGVLPSSAHHQVGSARLERTLRRRGARAYVDLLVHHQLPMQQKQEWDVLCSVWSSVGEGLRRQGLTASSAASVVRLPFTQEAVDEPSWERSLAVLSWAMHFKGGNQFHIPSSDIAIVLHQYIQSLEDRVQGPNPQQMPVTEEQAVIQQLQQWWNSAREAEQRDAGLAAACGLDRTAFNSIHVEGRKVTLCLSDKELSKSTAAYAELLLQGRWEDVLEHIRLVATNVASGPFSRDRGADRRQGDDLSNQRAAAAGDCDDDEGKEEIALITDGGFGDVFFSIGSNVTSCGSSTTDALVALFNTPRPVFLKSKVWARSSSSPLGKPPREYLLALETPLETVLLQKPPVVGLRTRAFATRSDGGTSGIGLMGKVSCSDCSDKQLQESGECLRATSAALVELRRKLWILRQLPRHLSRSLVRFEGAGSFMVPYLLRCPAKELLPWFLLSKVASAHSRHQNQEKLEEAFRDTRLHVLYTLFLPHAHYAAFQEYCADLLLQVGSLIVPLDVLRVAVRVLLQPPSFDHFYDVLQGRRLPVEVDCRHLWSRSVESSHVERESDCSTSLTPSCLSLLKELQGDAAKRQAFFVCKSHSARNYHLSTWIESCSKVETLSGLIGIIAREVNLYGPPLLSPEAAAALLTAIVIPHIGERGGAKYEGCEQASEIGNDTLRMLGVAYFVLPSDKAFGAAPYFKGTYNEKYIIDDGFEWTTDWDGAEALLVGRSLRRVTKYPTTTTESFFRVECCSTQQMVTYRVPKLRLRLMKVDLVEAIQYFECGVKRITQDEGANDKICGETVVGAVGRPAVVAYHLPFGVAAVDKPAGMSTTLHVGHPHLLDFLAGNLPWKGPSAPVLFQHGLVNRIDLGTSGLVLVADTEASLEEARRASIVERCVEKVYRALVLHCPPPISRIDTSECWYLNPCGIIMCDVLANGADFSLQIAAYNSSKGGALPVGAMDRRSATTTYRVLQYFPRSGVYYLEIHLHTGRRHQIRQHFARLCHPLLGDGRYSRRAQVVGEEFGLQRPALHAVRVTLTPQHGTSAKPRGGVVAPRVGDADYDEYCGNGGGKTVVECPVPEDMRLTLKMLREREDPVGLGA |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
22 |
0.132 |
- |
- |
| max. Y |
20 |
0.279 |
- |
- |
| max. S |
8 |
0.783 |
- |
- |
| mean S |
1--19 |
0.621 |
- |
- |
| D |
1--19 |
0.464 |
0.45 |
YES |
| Name=Q38EM9 SP='YES' Cleavage site between pos. 19 and 20: INH-KG D=0.464 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.035 |
0.844 |
0.313 |
S |
3 |
| ExpAA=0.04 |
First60=0.04 |
PredHel=0 |
Topology=o |