Selected Protein id is Q38CN1
Primary Information
| UniportKB Entry | Q38CN1 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | Tb09.244.0200 |
| Protein Name | Variant surface glycoprotein (VSG, atypical), putative |
| Length | 533 |
| Sequence | MQRLALALLVIIGPKLAAGENMVYGENRAEHAALCAFIRMADRAVAVPTVEPLDKDDYNYIQELNFTLSPAEWQAKFYKEAERKTVHDNADSAGIKDADEAEFWDDWKAAAEALKQGEDNQKVKQAVTPELTKTAKQLAAVQLAAIALEVKQLLKRYPNVNPEAAKYQSASPTAAIMAAALGQGDAKATNIDASKPFSATVSGNRQTVCEVKTSGVRPATALATLTCICHKDNGNPVTDGACTEKAEASTAWTSSATPPDSSDYQKLAKSCGAPPQEPITTTELEHAIATVRALIHTDGTNGYLGAFRGTDCSGASNSGMCIKFTGLVASPEKENELQWLTTIKTIATNLKHLEQAKAAAATAAISHSRALAAAMDKLSTKFSDSVETAINVRCETHNKSKTECLGAKCKWGGKKEDDGPCTPTEDQVAEQPARSTETEGAPKEGAAATGCARHGDDKTACENDKTGDKQNCAWRIGKDNEDDKEKEKFRSSSFLLNKQLALSMVAEFVSLIASQNLKIIRVLLIFMKIMNIS |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
20 |
0.743 |
- |
- |
| max. Y |
20 |
0.755 |
- |
- |
| max. S |
16 |
0.893 |
- |
- |
| mean S |
1--19 |
0.771 |
- |
- |
| D |
1--19 |
0.764 |
0.45 |
YES |
| Name=Q38CN1 SP='YES' Cleavage site between pos. 19 and 20: AAG-EN D=0.764 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.055 |
0.883 |
0.068 |
S |
1 |
| ExpAA=3.75 |
First60=0.09 |
PredHel=0 |
Topology=o |