Selected Protein id is Q38CM7
Primary Information
| UniportKB Entry | Q38CM7 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | Tb09.244.0050 |
| Protein Name | Variant surface glycoprotein (VSG, atypical), putative |
| Length | 497 |
| Sequence | MTVQACNSVSGTTIRSGMKSVATALLFLCVVRPAGASDGTAVAAVSDECGEIAYLQHLKSHDSRVAGDAAQSVATLTHEAHILTLAAEKHHGTINGAKYAFLAAIAADAKTEAVQTKLSQAAGPITSTAAERARRKGQLKALRHLNQATTAEYGETAVKAGTPTTIIGSADLGVTVKMQLNTAKADKCFLEATEPADIKNIVSEIANNDNYKGVDDSSFRPPQAELQMASRGNSPASMTNCERGRCCGDGAAMTSTNFLGLGTATKGQANTLTASTEPFKAGNQCTSPKKATSGDEAVINRKRTAHYLCNARQIQTQTTSSIKQTTVGQLRASEKANRLALAALGQTPKEGDNEQGKNAVKKLLGTDDSKTLDKFFSALETVDLQLSQDKGASKTSIKAAGESDNYGFALAYFSGQALKRTEEAAKSVTKATQAKEDDCTGKKRTECKGECELDGEICKPKKKEDGENKEKTGTTNTTGSNSFVIKAPILLALSLRA |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
37 |
0.771 |
- |
- |
| max. Y |
37 |
0.722 |
- |
- |
| max. S |
31 |
0.895 |
- |
- |
| mean S |
1--36 |
0.517 |
- |
- |
| D |
1--36 |
0.612 |
0.45 |
YES |
| Name=Q38CM7 SP='YES' Cleavage site between pos. 36 and 37: AGA-SD D=0.612 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.215 |
0.288 |
0.200 |
S |
5 |
| ExpAA=1.13 |
First60=1.12 |
PredHel=0 |
Topology=o |