Selected Protein id is Q380W3
Primary Information
| UniportKB Entry | Q380W3 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | Tb11.16.0003 |
| Protein Name | Variant surface glycoprotein (VSG), putative |
| Length | 494 |
| Sequence | MSYQQASLGAVTITLMLLAPTETNADSQSTKAAEAANTPCKAVLFMEKLAASLQTKLAAEMEKAKARTDEAAELAVAAAAAEQDNKRLGYNILRAIALQAQAKQMAQLKQLDAVYAPAVTQLVNLSTRLRQAAMANKRIISSRGTPTHGAAPANGATNADASCKYAGWTQTLGDINCKEETELTGDLATANIQAEGLTKIPYPNTAFLNSLAADITAFSKGTPTNANTGSQTWVCSSGADAAVGTIGQSHAIGTLVQPTAVEHGLTAIEITGANKEKNCKGPEQGTSTEERAKAVFLSAICNLAAVATESIGSALATTTTGLKSGAQAATIVKAAMQGAGLLSSDANNVDKAALEKFISSTFGPSDKAVEDDFIAPLDKVKLNYIANNKETTETPTAIAQGKNVAVALAFFSGKALKTGAIKNTKPDIGSKPTEKCKPDTKENEYKKDEDCEHKDGKCKLKEGVKVENDGKTNTTARNSFVINKAPLLLAVLLL |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
26 |
0.504 |
- |
- |
| max. Y |
26 |
0.54 |
- |
- |
| max. S |
18 |
0.735 |
- |
- |
| mean S |
1--25 |
0.589 |
- |
- |
| D |
1--25 |
0.566 |
0.45 |
YES |
| Name=Q380W3 SP='YES' Cleavage site between pos. 25 and 26: TNA-DS D=0.566 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.011 |
0.837 |
0.284 |
S |
3 |
| ExpAA=0.12 |
First60=0.06 |
PredHel=0 |
Topology=o |