Selected Protein id is Q380U6
Primary Information
| UniportKB Entry | Q380U6 |
| Taxonomy ID | 185431 |
| Organism | Trypanosoma brucei brucei (strain 927/4 GUTat10.1) |
| Gene Name | Tb11.38.0005 |
| Protein Name | Variant surface glycoprotein (VSG, atypical), putative |
| Length | 509 |
| Sequence | MTPQATALLALALTAEQARGNIPAGANEQEFGALCAIVDLSRSDITINQFPDQTAALEGAVLALNMSLADESWQKRFSKDGAKKEWIKELPAGTADPGHWKKSWPKWAAAAARLADQGTAAEIKSSGFETLNPIERAGAKASVAQIAAEAQFLTQQIAEKENVGKKHTAATVKAALNEAIYGVKQEAPPDFEPTRNYDGLNTQAREAICVGLGSEAKTTTIAGAIYCICGQDNAQAEKVCARNQADTHKWTSITNAMTKDGFEEIVKHCAGPAKTHLTSSLLMGLITKIKNLIRRVGANAYMGALKTGSSCNGDKTQGICIKYAGYDGTPTKDFAAIPWAQKLLALHDDLRQQEKAIAEATALEQQLAVAKNKAYAAALLQKTAPPTAGQTSSDNVNRKGDQGTQPTNKCNQIVTEETCNKENECSYEKESDGTKRCKYNATKATANGVPVTQPQKGPAKTTENKCKWKPEKDFKSPDCKWDGKECKNSSIIANKQFAMIVSAFVAMVF |
Summary
| Secretion Pathway | Classical Pathway |
| SignalP | Yes |
| SecretomeP | No |
| TMHMM | No |
Secretory Prediction
SignalP for Signal Peptide Prediction
SignalP-NN result
| Measure | Position | Value | Cutoff | signal peptide |
| max. C |
21 |
0.619 |
- |
- |
| max. Y |
21 |
0.557 |
- |
- |
| max. S |
8 |
0.66 |
- |
- |
| mean S |
1--20 |
0.5 |
- |
- |
| D |
1--20 |
0.526 |
0.45 |
YES |
| Name=Q380U6 SP='YES' Cleavage site between pos. 20 and 21: ARG-NI D=0.526 D-cutoff=0.450 Networks=SignalP-noTM |
| mTP | SP | other | Loc | RC |
| 0.042 |
0.859 |
0.153 |
S |
2 |
| ExpAA=0.02 |
First60=0.00 |
PredHel=0 |
Topology=o |